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Author: Nitsan Dahan

15/04/2024
in Uncategorized
by Nitsan Dahan

LS&E hosted the Israeli bio-analyst community for special workshop on NAPARI

On the April 10th the Israeli bio-analyst community were hosted by the LS&E microscopy unit for the first workshop in Israel on Napari. Napari is a Python library for n-dimensional image visualisation, annotation, and analysis. The workshop included 18 bio-analysts from Weizmann institute, Bar Ilan University, Hebrew University and the Technion institute. The workshop was take place at the computer farm in the Faculty of Biotechnology and Food Eng. in the upper campus of the Technion.   The Agenda: 9:20           meet @ the LS&E microscopy unit 9:30 - 10:15     Introduction to napari 10:15 - 12:30    Basic napari hands-on 12:30 - 13:30    Launch 13:30 - 16:00    Advanced napari plugins The hands-on tutorial was done on the bio-analyst computers. Thanks to DR. Yael Lupo-Haber for the great hands-on Napari worshop. It was very practical and gave a good boost into Napari community. ...

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07/02/2024
in Uncategorized
by Nitsan Dahan

Save the date March 4th – Special mini-symposium: To see beyond the dots

The LS&E Infrastructure Center invites you to a special mini-symposium on: Flow imaging at the LSE – To see beyond the dots Date:   Monday @ 9:00 AM , March 4th 2024, Place: Faculty of Biology, Auditorium Agenda: 9:00 – Coffee and gathering 9:15 – Yousef Mansour, LSE Flow Cytometry Unit: Introduction to imaging flow cytometry 10:15 - Guest lecture: Dr. Ziv Porat, Head of Flow Cytometry Center, Weizmann Institute of Science: Applications of Imaging Flow Cytometry - to see beyond the dot 11:00-12:15 – Students presentations: Miri Steinberg, Deddi Meiri’s Lab, Faculty of Biology: Assessing cancer phagocytosis by macrophages using the Imagestream flow cytometry Yael Shalev-Ezra, Yoav Shechtman’s Lab, Faculty of Biomedical Engineering: High-throughput multi-dimensional tracking of DNA double-strand break repair in live cells Dareen Sader, Alejandro Sosnik Lab, Faculty of Material Engineering: Polymeric nanoparticles for the encapsulation and delivery of Anti-cancer Therapeutics                             For more information, contact Dr. Aviv Lutaty or Yousef Mansour at the LSE Flow Cytometry team Hope to see you all, LS&E team...

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08/02/2023
in News
by Nitsan Dahan

LS&E Advanced Research Day- Thursday, March 2nd, 2023, Biology Auditorium

The LS&E are delighted to invite you to the LS&E research day. The meeting will be held on Thursday, March 2nd, 2023 @ the Biology Auditorium, Technion upper Campus, Haifa. This annual LS&E meeting will congregate young researchers from an interdisciplinary research area that uses the LS&E services and equipment. This meeting is a good opportunity to meet friends and discuss new methodologies and ideas, while learning about the availability of new applications and systems. Below you can find the full detailed agenda for the LS&E research day  LS&E Research Day Agenda  8:30 Meet and coffee 9:00 Introducing the LS&E Maayan Duvshani Eshet, LS&E head. 9:15 Research presentations: •  Bar Cohen , Yoav Arava Lab, Faculty of Biology Cox 7 c mRNA co transport with mitochondria along axons via a coding region dependent mechanism • Megan Sammons , Asya Rolls Lab, Faculty of Medicine Mapping neuronal representations of peripheral immune responses • Yonit Maroudas Sacks , Kinneret Keren Lab, Faculty of Physics Tissue organization and...

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18/01/2023
in Events
by Nitsan Dahan

Save the Date # March 2ed 2023

The LS&E infrastructure center is happy to invite you to the LS&E Advanced Research Day. The day will take place at the Faculty of Biology Auditorium between 9:00 14:00 The day will include:  Students presentation Special guest lecture Advanced research applications at the LS&EMore details will be posted soon Hope to see you all, LS&E team ...

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22/06/2020
in Uncategorized
by Nitsan Dahan

22 June – the newest ZEISS Light-Sheet 7 would be installed at the LS&E this year.

The LS&E Microscopy Core Facility Center is pleased to announce that the newest ZEISS Light-Sheet 7 would be installed at the LS&E this year.   The new Light-Sheet 7 microscope is dedicated for multi-view imaging for Living sample and as well as for Optically Cleared Specimens. The exceptional stability of Light-Sheet 7 enables to observe living samples over extended periods of time – even days – with minimal photo-toxicity than ever before. In addition, the new light sheet microscope can image very large optically cleared specimens with subcellular resolution. Light-Sheet 7 designed to image specimens at up to 2 cm in size at any refractive index between 1.33 and 1.58, and in almost all clearing solutions. The Light-Sheet 7 have dedicated optics, sample chambers and sample holders to match accurately the desired refractive index for multiplicity clearing method with the ability to image large samples or cleared organ/tissue such as mouse brain,...

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10/10/2019
in Events, News
by Nitsan Dahan

LS&E Day for Image Processing & Analysis

On Dec. 25th @ Room 300 Biotechnology & Food Eng., Technion Agenda: 09:00-09:15 Gathering & coffee 09:15-09:30 LS&E infrastructure overview 09:30-11:00 Introduction to image processing & analysis 11:00-11:20 Coffee break 11:20-12:00 Advanced de-convolution (Dr. Douglas Lutz) 12:00-12:50 Image analysis tools (Fiji, Ilastik, Imaris, CellProfiler) & applications 12:50-13:00 Summary & New @ The LSE Registration is needed. Please register here LSE DAY for IA . For more information, please contact Dr. Yael Lupu Haber: yaelupu@technion.ac.il , 1386  ...

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04/02/2019
in Uncategorized
by Nitsan Dahan

24 Feb – Arivis Workshop : Seminar, Live Demo and Hands On session

Dear all, The LS&E microscopy and image analysis core facility is happy to invite you to participate on Arivis Workshop. A workshop on Large image data, visualization, image processing and analysis. General agenda, o Sunday, Feb 24, 11:00 - in Emerson building floor 6 at Aquarium Room, general presentation and Live demo, open to everyone o Feb 24 afternoon: Hands-on session of arivis InViewR and arivis Vision4D, by registration only - ndahan@technion.ac.il Please find out more details on the enclosed PDF. For more information, Please contact: Dr. Nitsan Dahan, 077-8871385, ndahan@technion.ac.il Dr. Yael Lupu-Haber, 077-8871386, yaelupu@technion.ac.il   Looking forwards to see You, The Microscopy Team...

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04/02/2019
in News
by Nitsan Dahan

Single Cell workshop at the Technion Genome Center

Dear all, We are happy to invite you to a Single Cell Sequencing Applications Workshop at the Technion Genome Center. The workshop will take place on February 27th, at the Technion, Faculty of Biology, Auditorium. Please find enclosed the program. Technion Genome Center Single Cell Workshop Participation is free but registration is required. Please register here. For more information, please contact Dr. Tal Katz-Ezov, 04-8295168, talke@technion.ac.il The TGC team    ...

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